Open Dataset
Data Structure ?
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Data Structure ?
*The above analysis is the result extracted and analyzed by the system, and the specific actual data shall prevail.
README.md
文脈
土壌は数千種類の異なる生物種(主に細菌)で構成されています。市民科学を通じて、マサチューセッツ州ソマービル周辺の様々な場所からサンプルを収集し、土壌生物のDNAを抽出する手順を実行し、その後サンプルをシーケンシングのために送付します。
内容
このデータリポジトリは、シーケンシングを行った会社から受け取った生データの構造とファイル(私の理解では)です。
[TODO - ベンダーは誰?]
**analysisfiles/**
各サンプル('L1'、'L2'、'L3'、'L4'、'M1'、'M2'、'SH3'、'SH4'、'SH5'、'SH6')の細菌構成の「結果」を階層(['属', '界', '綱', '目', '不明', '門', '科', '同一性', '種'])別に含んでいます。
**pipeline/**
私はわかりません(生データの読み取り結果を既知の種別に分類するために必要な二次データ?)
**fasta - qual - mapping - files/**
私はわかりません(別の形式の生データの読み取り結果?)
**root/*.fastq**
私はわかりません(すべてのサンプルの生データの読み取り結果?)
注:
多くの.txtファイルはタブ区切りファイルです。
各.txtファイルには、閲覧しやすいようにtxt.xlsx形式のコピーが用意されています。
謝辞
データ収集:Mrina Nikrad、Dennis Oleksyuk、Raphael Laurenceau
当研究室のウェブサイト:https://www.boslab.org/
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The dataset is currently being organized and other channels have been prepared for you. Please use them
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- 1. The data originates from internet data collection or provided by service providers, and this platform offers users the ability to view and browse datasets.
- 2. This platform serves only as a basic information display for datasets, including but not limited to image, text, video, and audio file types.
- 3. Basic dataset information comes from the original data source or the information provided by the data provider. If there are discrepancies in the dataset description, please refer to the original data source or service provider's address.
- 1. All datasets on this site are copyrighted by their original publishers or data providers.
- 1. If you need to repost data from this site, please retain the original data source URL and related copyright notices.
- 1. If any data on this site involves infringement, please contact us promptly, and we will arrange for the data to be taken offline.